Course curriculum

  • 1

    RNA-Seq & Experimental Design

    • RNA-Seq & Experimental Design

    • Knowledge Check: Experimental Design

    • Spike-Ins And Why You Should Use Them

  • 2

    The RNA-Seq Pipeline, Part 1

    • An Overview of the Bulk RNA-Seq Pipeline

    • Trimming and Quality Control

    • Knowledge Check: Quality Scores

    • Expression Quantification

    • Knowledge Check: Alignment Rate

  • 3

    The RNA-Seq Pipeline, Part 2

    • Differential Expression

    • Differential Expression: Changing Default Options

    • Principal Component Analysis

    • Knowledge Check: Principal Component Analysis

    • Knowledge Check: What's Wrong With This Sample?

    • Pathway Analysis

    • Knowledge Check: Measures for Determining Significance